public abstract static class AbstractMultipleHypothesisComparison.Statistic extends AbstractCloneableSerializable implements MultipleHypothesisComparison.Statistic
Modifier and Type | Field and Description |
---|---|
protected Matrix |
nullHypothesisProbabilities
Null Hypothesis probability associated with the (i,j)
treatment comparison
|
protected Matrix |
testStatistics
Test statistic associated with the (i,j) treatment comparison
|
protected int |
treatmentCount
Number of treatments being compared
|
protected double |
uncompensatedAlpha
Uncompensated alpha (p-value threshold) for the multiple comparison
test
|
Constructor and Description |
---|
Statistic()
Default constructor
|
Modifier and Type | Method and Description |
---|---|
AbstractMultipleHypothesisComparison.Statistic |
clone()
This makes public the clone method on the
Object class and
removes the exception that it throws. |
double |
getNullHypothesisProbability(int i,
int j)
Gets the Null Hypothesis probability associated with the (i,j)
treatment comparison
|
double |
getTestStatistic(int i,
int j)
Gets the test statistic associated with the (i,j) treatment
comparison
|
int |
getTreatmentCount()
Gets the number of treatments being compared
|
double |
getUncompensatedAlpha()
Gets the uncompensated alpha (p-value threshold) for the multiple
comparison test
|
java.lang.String |
toString() |
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
acceptNullHypothesis
protected int treatmentCount
protected double uncompensatedAlpha
protected Matrix testStatistics
protected Matrix nullHypothesisProbabilities
public AbstractMultipleHypothesisComparison.Statistic clone()
AbstractCloneableSerializable
Object
class and
removes the exception that it throws. Its default behavior is to
automatically create a clone of the exact type of object that the
clone is called on and to copy all primitives but to keep all references,
which means it is a shallow copy.
Extensions of this class may want to override this method (but call
super.clone()
to implement a "smart copy". That is, to target
the most common use case for creating a copy of the object. Because of
the default behavior being a shallow copy, extending classes only need
to handle fields that need to have a deeper copy (or those that need to
be reset). Some of the methods in ObjectUtil
may be helpful in
implementing a custom clone method.
Note: The contract of this method is that you must use
super.clone()
as the basis for your implementation.clone
in interface CloneableSerializable
clone
in class AbstractCloneableSerializable
public int getTreatmentCount()
MultipleHypothesisComparison.Statistic
getTreatmentCount
in interface MultipleHypothesisComparison.Statistic
public double getUncompensatedAlpha()
MultipleHypothesisComparison.Statistic
getUncompensatedAlpha
in interface MultipleHypothesisComparison.Statistic
public double getTestStatistic(int i, int j)
MultipleHypothesisComparison.Statistic
getTestStatistic
in interface MultipleHypothesisComparison.Statistic
i
- First treatment indexj
- Second treatment indexpublic double getNullHypothesisProbability(int i, int j)
MultipleHypothesisComparison.Statistic
getNullHypothesisProbability
in interface MultipleHypothesisComparison.Statistic
i
- First treatment indexj
- Second treatment indexpublic java.lang.String toString()
toString
in class java.lang.Object